X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.5298ammonium sulfate, TRIS, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.753.4

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 119.947α = 90
b = 64.482β = 97.17
c = 121.91γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCHOsmic2001-05-29MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RU2001.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.59992.20.0749.53.2594845948438.3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.52.5952.40.2072.61.83341

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.5012052312275285.630.190680.190680.187290.25493RANDOM24.728
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.420.05-0.49-0.92
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.363
r_dihedral_angle_4_deg22.431
r_dihedral_angle_3_deg17.252
r_dihedral_angle_1_deg6.708
r_scangle_it3.669
r_scbond_it2.412
r_angle_refined_deg1.935
r_mcangle_it1.463
r_mcbond_it0.843
r_nbtor_refined0.313
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.363
r_dihedral_angle_4_deg22.431
r_dihedral_angle_3_deg17.252
r_dihedral_angle_1_deg6.708
r_scangle_it3.669
r_scbond_it2.412
r_angle_refined_deg1.935
r_mcangle_it1.463
r_mcbond_it0.843
r_nbtor_refined0.313
r_symmetry_vdw_refined0.295
r_nbd_refined0.232
r_symmetry_hbond_refined0.167
r_xyhbond_nbd_refined0.16
r_chiral_restr0.127
r_bond_refined_d0.02
r_gen_planes_refined0.007
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms12160
Nucleic Acid Atoms
Solvent Atoms374
Heterogen Atoms216

Software

Software
Software NamePurpose
HKL-2000data collection
SCALEPACKdata scaling
AMoREphasing
REFMACrefinement
HKL-2000data reduction