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Structure of a beta-1,3-glucan binding CBM6 from Bacillus halodurans in complex with laminarihexaose
Crystallization Crystal Properties Matthews coefficient Solvent content 3.68 66.55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.551 α = 90 b = 61.551 β = 90 c = 121.711 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 113 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 20 95.5 0.06 17.8 5.8 12975 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.17 93.5 0.37 4.4 6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.1 20 12975 689 95.5 0.208 0.205 0.216 0.267 RANDOM 44.4
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.87 1.87 -3.75
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.663 r_scangle_it 4.168 r_scbond_it 2.616 r_angle_refined_deg 2.166 r_mcangle_it 1.742 r_angle_other_deg 1.394 r_mcbond_it 0.961 r_symmetry_vdw_other 0.297 r_nbd_other 0.256 r_nbd_refined 0.224
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.663 r_scangle_it 4.168 r_scbond_it 2.616 r_angle_refined_deg 2.166 r_mcangle_it 1.742 r_angle_other_deg 1.394 r_mcbond_it 0.961 r_symmetry_vdw_other 0.297 r_nbd_other 0.256 r_nbd_refined 0.224 r_xyhbond_nbd_refined 0.201 r_chiral_restr 0.153 r_symmetry_hbond_refined 0.14 r_symmetry_vdw_refined 0.122 r_nbtor_other 0.095 r_bond_refined_d 0.019 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1054 Nucleic Acid Atoms Solvent Atoms 121 Heterogen Atoms 69
Software Software Software Name Purpose REFMAC refinement MOLREP phasing