1Z6B

Crystal structure of Plasmodium falciparum FabZ at 2.1 A

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	6	289	PEG 8000, cacodylate, ammonium sulfate, glycerol, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 289K

Crystal Properties
Matthews coefficient	Solvent content
2.5	50.7

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 90.604	α = 90
b = 127.49	β = 90
c = 173.673	γ = 90

Symmetry
Space Group	C 2 2 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	MARRESEARCH	Sagitally focused Si(111)	2003-06-25	M	SINGLE WAVELENGTH
2	1	x-ray	100	IMAGE PLATE	MARRESEARCH	Osmics Mirrors	2002-04-22	M	SINGLE WAVELENGTH
3	1	x-ray	100	IMAGE PLATE	MARRESEARCH	Osmics Mirrors	2002-08-20	M	SAD

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SLS BEAMLINE X06SA	1.0715	SLS	X06SA
2	ROTATING ANODE	ENRAF-NONIUS FR591	1.5418
3	ROTATING ANODE	ENRAF-NONIUS FR591	1.5418

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Sym I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1,2,3	2.09	40	99.6	0.1	10.9	7.3	59472	59472		-3	55.6

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R-Sym I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1,2,3	2.09	2.15	100		0.83	2.4	7	4802

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (All)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	SAD	THROUGHOUT	2.09	87.71	56487	56487	2984	99.6	0.177	0.177	0.174	0.24	0.222	0.27	RANDOM	60.666

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-1.26			-0.09		1.35

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	36.402
r_dihedral_angle_3_deg	16.361
r_dihedral_angle_4_deg	14.396
r_dihedral_angle_1_deg	6.785
r_scangle_it	6.135
r_scbond_it	4.832
r_mcangle_it	3.017
r_mcbond_it	2.439
r_angle_refined_deg	1.374
r_angle_other_deg	0.786
r_mcbond_other	0.628
r_symmetry_hbond_refined	0.263
r_symmetry_vdw_other	0.198
r_nbd_refined	0.191
r_nbd_other	0.171
r_xyhbond_nbd_refined	0.144
r_symmetry_vdw_refined	0.128
r_xyhbond_nbd_other	0.116
r_chiral_restr	0.084
r_nbtor_other	0.084
r_bond_refined_d	0.013
r_gen_planes_refined	0.005
r_bond_other_d	0.002
r_gen_planes_other	0.001
r_nbtor_refined
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	6401
Nucleic Acid Atoms
Solvent Atoms	256
Heterogen Atoms	71

Software

Software
Software Name	Purpose
REFMAC	refinement
MAR345	data collection
XDS	data scaling
SHARP	phasing