2AXL
Solution structure of a multifunctional DNA- and protein-binding domain of human Werner syndrome protein
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | D_15N-separated_NOESY | 0.35 mM in KPi buffer (pH7.4) 25 mM NaCl | 92.5% H2O/7.5% D2O | 25 mM KPi + 25 mM NaCl | 7.4 | 1 atm | 295.2 | |
2 | 3D_15N-separated_NOESY | 0.35 mM in KPi buffer (pH7.4) 25 mM NaCl | 92.5% H2O/7.5% D2O | 25 mM KPi + 25 mM NaCl | 7.4 | 1 atm | 295.2 | |
3 | 4D_13C-separated_NOESY | 0.35 mM in KPi buffer (pH7.4) 25 mM NaCl | 92.5% H2O/7.5% D2O | 25 mM KPi + 25 mM NaCl | 7.4 | 1 atm | 295.2 | |
4 | 4D_13C/15N-separated_NOESY | 0.35 mM in KPi buffer (pH7.4) 25 mM NaCl | 92.5% H2O/7.5% D2O | 25 mM KPi + 25 mM NaCl | 7.4 | 1 atm | 295.2 | |
5 | HNHA | 0.35 mM in KPi buffer (pH7.4) 25 mM NaCl | 92.5% H2O/7.5% D2O | 25 mM KPi + 25 mM NaCl | 7.4 | 1 atm | 295.2 | |
6 | HNCG_arom, HN(CO)CG_arom | 0.35 mM in KPi buffer (pH7.4) 25 mM NaCl | 92.5% H2O/7.5% D2O | 25 mM KPi + 25 mM NaCl | 7.4 | 1 atm | 295.2 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing torsion angle dynamics | xplor-nih |
NMR Ensemble Information | |
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Conformer Selection Criteria | back calculated data agree with experimental NOESY spectrum,structures with acceptable covalent geometry |
Conformers Calculated Total Number | 40 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (fewest violations) |
Additional NMR Experimental Information | |
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Details | HCCH-COSY was optimized for detection for CH3 groups, 2D spin echo for 1H-13C HSQC selected for aromatic and Carbonyl containing residues |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | xplor-nih | XPLOR-NIH | Schwieters, C.D., Kuszewski, J., Tjandra, N. & Clore, G.M. (2003) |
2 | refinement | xplor-nih | XPLOR-NIH | Schwieters, C.D., Kuszewski, J., Tjandra, N. & Clore, G.M. (2003) |