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Crystal structure of Deinococcus radiodurans maltooligosyltrehalose trehalohydrolase in complex with maltose
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.5 20% (W/V) PEG 2000 MME, 20% (W/V) MALTOSE, 0.1 M TRIS-HCL PH 8.5 AND 0.1 M MGCL2
Crystal Properties Matthews coefficient Solvent content 2.3 45
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 59.145 α = 90 b = 66.565 β = 90 c = 153.501 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2004-02-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-2 ESRF ID14-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.2 20 99.2 0.06 12.6 3.8 187653
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.2 1.26 95.2 0.39 2.5 2.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 1.2 76.7 178120 9432 99 0.125 0.125 0.1394 0.142 0.1541 RANDOM 9.09
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.6 -0.59 -0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.239 r_dihedral_angle_4_deg 16.72 r_dihedral_angle_3_deg 11.601 r_dihedral_angle_1_deg 5.671 r_scangle_it 2.11 r_scbond_it 1.55 r_angle_refined_deg 1.366 r_mcangle_it 1.114 r_mcbond_it 0.859 r_angle_other_deg 0.819
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.239 r_dihedral_angle_4_deg 16.72 r_dihedral_angle_3_deg 11.601 r_dihedral_angle_1_deg 5.671 r_scangle_it 2.11 r_scbond_it 1.55 r_angle_refined_deg 1.366 r_mcangle_it 1.114 r_mcbond_it 0.859 r_angle_other_deg 0.819 r_nbd_refined 0.299 r_symmetry_vdw_other 0.26 r_nbd_other 0.199 r_nbtor_refined 0.181 r_symmetry_hbond_refined 0.158 r_xyhbond_nbd_refined 0.152 r_symmetry_vdw_refined 0.131 r_chiral_restr 0.101 r_nbtor_other 0.089 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4660 Nucleic Acid Atoms Solvent Atoms 995 Heterogen Atoms 175
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling