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Crystal structure of rat carnitine palmitoyltransferase 2 in space group P43212
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 294 0.15 M DL-malic acid
20 % (w/v) PEG3350, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 294K
Crystal Properties Matthews coefficient Solvent content 2.36 47.95
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 67.55 α = 90 b = 67.55 β = 90 c = 307.28 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2005-06-09 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA 0.97853 SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 23 0.031 28.04 49518 49466
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2 2.12 100 0.074 14.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2 23 46957 2507 100 0.18212 0.17931 0.18 0.23457 0.2366 RANDOM 21.916
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.18 -0.18 0.37
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.944 r_dihedral_angle_4_deg 17.514 r_dihedral_angle_3_deg 12.74 r_dihedral_angle_1_deg 5.736 r_scangle_it 4.468 r_scbond_it 3.191 r_mcangle_it 1.901 r_mcbond_it 1.34 r_angle_refined_deg 1.161 r_nbtor_refined 0.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.944 r_dihedral_angle_4_deg 17.514 r_dihedral_angle_3_deg 12.74 r_dihedral_angle_1_deg 5.736 r_scangle_it 4.468 r_scbond_it 3.191 r_mcangle_it 1.901 r_mcbond_it 1.34 r_angle_refined_deg 1.161 r_nbtor_refined 0.3 r_nbd_refined 0.202 r_symmetry_vdw_refined 0.191 r_xyhbond_nbd_refined 0.152 r_symmetry_hbond_refined 0.134 r_chiral_restr 0.078 r_bond_refined_d 0.01 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4976 Nucleic Acid Atoms Solvent Atoms 525 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MAR345 data collection XDS data scaling PHASER phasing