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Crystal structure of the C-terminal domain of human EB1 in complex with the CAP-Gly domain of human Dynactin-1 (p150-Glued)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 298 1.3 M Trisodium Citrate, 0.1M HEPES Buffer, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.99 38.21
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 53.156 α = 90 b = 79.597 β = 109.29 c = 38.935 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 2005-04-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.86 42.45 97.7 12595 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.86 1.908 96
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.86 42.45 11978 11978 616 97.93 0.17887 0.17686 0.1787 0.21732 0.2134 RANDOM 25.413
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.43 -0.32 -0.29 -1.35
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.192 r_dihedral_angle_4_deg 13.66 r_dihedral_angle_3_deg 12.907 r_dihedral_angle_1_deg 8.526 r_scangle_it 6.821 r_scbond_it 4.793 r_mcangle_it 3.137 r_mcbond_it 1.995 r_angle_refined_deg 1.44 r_nbtor_refined 0.308
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.192 r_dihedral_angle_4_deg 13.66 r_dihedral_angle_3_deg 12.907 r_dihedral_angle_1_deg 8.526 r_scangle_it 6.821 r_scbond_it 4.793 r_mcangle_it 3.137 r_mcbond_it 1.995 r_angle_refined_deg 1.44 r_nbtor_refined 0.308 r_nbd_refined 0.199 r_symmetry_hbond_refined 0.176 r_symmetry_vdw_refined 0.173 r_xyhbond_nbd_refined 0.168 r_chiral_restr 0.125 r_bond_refined_d 0.012 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1074 Nucleic Acid Atoms Solvent Atoms 74 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling MOLREP phasing