X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
123% (w/v) polyethylene glycol (PEG) 8000, 0.2 M calcium acetate hydrate, 0.1 M sodium cacodylate (pH 5.8)
Crystal Properties
Matthews coefficientSolvent content
2.1442.1

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 44.778α = 89.9
b = 56.845β = 78.28
c = 90.7γ = 82.33
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC CCDMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSRS BEAMLINE PX14.1SRSPX14.1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.836930.067.52.284823
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.81.9890.31.82.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.7936.271906378492.60.1540.1510.196RANDOM25.84
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.180.09-0.010.090.040.07
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.436
r_dihedral_angle_4_deg16.951
r_dihedral_angle_3_deg12.295
r_dihedral_angle_1_deg5.713
r_sphericity_free3.814
r_scangle_it2.644
r_scbond_it1.828
r_sphericity_bonded1.757
r_angle_refined_deg1.339
r_rigid_bond_restr1.187
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.436
r_dihedral_angle_4_deg16.951
r_dihedral_angle_3_deg12.295
r_dihedral_angle_1_deg5.713
r_sphericity_free3.814
r_scangle_it2.644
r_scbond_it1.828
r_sphericity_bonded1.757
r_angle_refined_deg1.339
r_rigid_bond_restr1.187
r_mcangle_it1.186
r_mcbond_it0.864
r_nbtor_refined0.303
r_symmetry_vdw_refined0.235
r_nbd_refined0.209
r_symmetry_hbond_refined0.169
r_xyhbond_nbd_refined0.156
r_chiral_restr0.092
r_bond_refined_d0.012
r_gen_planes_refined0.005
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6172
Nucleic Acid Atoms
Solvent Atoms1162
Heterogen Atoms140

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling