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Human Thrombin Hirugen Inhibitor complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.8 PH 6.80
Crystal Properties Matthews coefficient Solvent content 2.54 51.21
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 70.363 α = 90 b = 71.478 β = 100.62 c = 72.106 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD NONIUS MIRRORS 2002-05-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 19.71 98 0.04 3 11571
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.58 0.33
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.5 19.71 11571 581 100 0.188 0.185 0.1704 0.231 0.2245 RANDOM 33.99
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.13 -0.54 -0.36 0.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.304 r_dihedral_angle_4_deg 13.424 r_dihedral_angle_3_deg 12.309 r_scangle_it 4.527 r_dihedral_angle_1_deg 4.111 r_scbond_it 2.989 r_mcangle_it 2.443 r_angle_refined_deg 1.629 r_mcbond_it 1.238 r_nbtor_refined 0.316
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.304 r_dihedral_angle_4_deg 13.424 r_dihedral_angle_3_deg 12.309 r_scangle_it 4.527 r_dihedral_angle_1_deg 4.111 r_scbond_it 2.989 r_mcangle_it 2.443 r_angle_refined_deg 1.629 r_mcbond_it 1.238 r_nbtor_refined 0.316 r_symmetry_vdw_refined 0.259 r_nbd_refined 0.217 r_symmetry_hbond_refined 0.178 r_xyhbond_nbd_refined 0.157 r_chiral_restr 0.105 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2346 Nucleic Acid Atoms Solvent Atoms 129 Heterogen Atoms 30
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling