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NMR structure of E.coli YfgJ modelled with two Zn+2 bound. Northeast Structural Genomics Consortium Target ER317.
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 1 mM [U-100% 13C] protein, 10 mM TRIS, 250 mM sodium chloride, 10 uM ZINC ION, 10 mM DTT, 0.01 % sodium azide, 95% H2O, 5% D2O 95% H2O/5% D2O 250 7.3 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 750 3 Varian INOVA 800
NMR Refinement Method Details Software simulated annealing simulated annealling using nih xplor, followed by cns water refinement. AutoStructure
NMR Ensemble Information Conformer Selection Criteria closest to the average Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 data analysis AutoStructure 2.1.1 Huang, Swapana, Rajan, Ke, Xia, Shukla, Inouye and Montelione 2 structure solution X-PLOR NIH 2.15.0 Schwieters, Kuszewski, Tjandra and Clore 3 refinement CNS 1.1 Brunger, Adams, Clore, Gros, Nilges and Read 4 peak picking Sparky 3.1 Goddard 5 processing NMRPipe linux9 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax