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Structure of Ribosomal Protein L14e from Sulfolobus solfataricus
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1 mM [U-100% 15N] L14e ribosomal protein-3, 0.2 mM DSS-4 90% H2O/10% D2O 0 5.0 ambient 303 2 3D HNCO 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 3 3D HNCACB 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 4 3D CBCA(CO)NH 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 5 3D HNCA 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 6 3D HN(CO)CA 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 7 3D HNHA 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 8 3D HCC_TOCSY-NNH 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 9 3D CCC-TOCSY-NNH 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 10 3D HCCH-TOCSY 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-2 100% D2O 0 5.0 ambient 303 11 3D HCCH-COSY 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-2 100% D2O 0 5.0 ambient 303 12 HBCBCGCDHD 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 13 2D DQF-COSY 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 14 2D 1H-1H NOESY 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 15 2D 1H-13C HSQC 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 16 3D 1H-15N NOESY 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 17 3D 1H-13C NOESY 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-2 100% D2O 0 5.0 ambient 303 18 2D 1H-15N HSQC 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-2 100% D2O 0 5.0 ambient 303 19 2D 1H-15N NOE 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 20 2D 1H-15N T1 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 21 2D 1H-15N T1rho 1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1 90% H2O/10% D2O 0 5.0 ambient 303 22 3D HNCO-IPAP 1 mM [U-100% 15N] L14e ribosomal protein-5, 5 % C12E5-6, 1.0 r hexanol-7 90% H2O/10% D2O 0 5.0 ambient 303
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 800 2 Varian INOVA 500
NMR Refinement Method Details Software simulated annealing VNMR
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 collection VNMR Varian 2 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 peak picking NMRView aqua Johnson, One Moon Scientific 4 chemical shift assignment NMRView aqua Johnson, One Moon Scientific 5 chemical shift assignment ARIA 1.2 Linge, O'Donoghue and Nilges 6 refinement X-PLOR NIH 2.19 Schwieters, Kuszewski, Tjandra and Clore