2KM0
Cu(I)-bound CopK
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1 mM [U-100% 15N] CopK-1, 0.95 mM COPPER(I) ION-2, 50 mM ammonium acetate-3, 10 mM sodium ascorbate-4 | 90% H2O/10% D2O | 6.8 | ambient | 298 | ||
2 | 3D 1H-15N NOESY | 1 mM [U-100% 15N] CopK-1, 0.95 mM COPPER(I) ION-2, 50 mM ammonium acetate-3, 10 mM sodium ascorbate-4 | 90% H2O/10% D2O | 6.8 | ambient | 298 | ||
3 | 3D 1H-13C NOESY | 1.6 mM [U-100% 13C; U-100% 15N] CopK-5, 1.5 mM COPPER(I) ION-6, 50 mM ammonium acetate-7, 16 mM sodium ascorbate-8 | 90% H2O/10% D2O | 6.8 | ambient | 298 | ||
4 | 2D 1H-1H NOESY | 1.5 mM CopK-9, 1.4 mM COPPER(I) ION-10, 50 mM ammonium acetate-11, 14 mM sodium ascorbate-12 | 100% D2O | 6.8 | ambient | 298 | ||
5 | 3D HNCO | 1.6 mM [U-100% 13C; U-100% 15N] CopK-5, 1.5 mM COPPER(I) ION-6, 50 mM ammonium acetate-7, 16 mM sodium ascorbate-8 | 90% H2O/10% D2O | 6.8 | ambient | 298 | ||
6 | 3D HNCACB | 1.6 mM [U-100% 13C; U-100% 15N] CopK-5, 1.5 mM COPPER(I) ION-6, 50 mM ammonium acetate-7, 16 mM sodium ascorbate-8 | 90% H2O/10% D2O | 6.8 | ambient | 298 | ||
7 | 3D HN(COCA)CB | 1.6 mM [U-100% 13C; U-100% 15N] CopK-5, 1.5 mM COPPER(I) ION-6, 50 mM ammonium acetate-7, 16 mM sodium ascorbate-8 | 90% H2O/10% D2O | 6.8 | ambient | 298 | ||
8 | 3D HNCA | 1.6 mM [U-100% 13C; U-100% 15N] CopK-5, 1.5 mM COPPER(I) ION-6, 50 mM ammonium acetate-7, 16 mM sodium ascorbate-8 | 90% H2O/10% D2O | 6.8 | ambient | 298 | ||
9 | 3D C(CO)NH | 1.6 mM [U-100% 13C; U-100% 15N] CopK-5, 1.5 mM COPPER(I) ION-6, 50 mM ammonium acetate-7, 16 mM sodium ascorbate-8 | 90% H2O/10% D2O | 6.8 | ambient | 298 | ||
10 | 3D HCCH-TOCSY | 1.6 mM [U-100% 13C; U-100% 15N] CopK-5, 1.5 mM COPPER(I) ION-6, 50 mM ammonium acetate-7, 16 mM sodium ascorbate-8 | 90% H2O/10% D2O | 6.8 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | Direct Drive | 600 |
2 | Varian | Direct Drive | 800 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, molecular dynamics | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 1000 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
2 | chemical shift assignment | NMRView | Johnson, One Moon Scientific | |
3 | peak picking | AtnosCandid | Torsten Herrmann | |
4 | structure solution | AtnosCandid | Torsten Herrmann | |
5 | structure solution | ARIA | 1.2 | Linge, O'Donoghue and Nilges |
6 | refinement | ARIA | 1.2 | Linge, O'Donoghue and Nilges |