2L0S
Solution Structure of Human Plasminogen Kringle 3
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1.0 mM [U-97% 15N] hPgn rK3-1 | 90% H2O/10% D2O | 0 | ambient | 298 | ||
2 | 3D 1H-15N TOCSY | 1.0 mM [U-97% 15N] hPgn rK3-1 | 90% H2O/10% D2O | 0 | ambient | 298 | ||
3 | 3D 1H-15N NOESY | 1.0 mM [U-97% 15N] hPgn rK3-1 | 90% H2O/10% D2O | 0 | ambient | 298 | ||
4 | 3D HNHA | 1.0 mM [U-97% 15N] hPgn rK3-1 | 90% H2O/10% D2O | 0 | ambient | 298 | ||
5 | 3D HNHB | 1.0 mM [U-97% 15N] hPgn rK3-1 | 90% H2O/10% D2O | 0 | ambient | 298 | ||
6 | 2D 1H-1H COSY | 1.0 mM [U-97% 15N] hPgn rK3-1 | 90% H2O/10% D2O | 0 | ambient | 298 | ||
7 | 2D 1H-1H TOCSY | 1.0 mM [U-97% 15N] hPgn rK3-1 | 90% H2O/10% D2O | 0 | ambient | 298 | ||
8 | 2D 1H-1H NOESY | 1.0 mM [U-97% 15N] hPgn rK3-1 | 90% H2O/10% D2O | 0 | ambient | 298 | ||
9 | 2D 1H-15N HSQC | 1.0 mM [U-97% 15N] hPgn rK3-1 | 90% H2O/10% D2O | 0 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 500 |
2 | Bruker | DRX | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, molecular dynamics | xwinnmr |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Additional NMR Experimental Information | |
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Details | The structure was determined using data collected at pH* 5.7 |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | xwinnmr | 2.6 | Bruker Biospin |
2 | processing | Felix | 98 | Accelrys Software Inc. |
3 | peak picking | CcpNMR | 1.0 | CCPN |
4 | chemical shift assignment | CcpNMR | 1.0 | CCPN |
5 | data analysis | CcpNMR | 1.0 | CCPN |
6 | structure solution | ARIA | 2.2 | Linge, O'Donoghue and Nilges |
7 | refinement | ARIA | 2.2 | Linge, O'Donoghue and Nilges |