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The solution structure of the ADAR2 dsRBM-RNA complex reveals a sequence-specific read out of the minor groove
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1 mM [U-100% 15N] entity_1-1, 1 mM RNA (71-MER)-2 90% H2O/10% D2O 0 7.6 ambient 310 2 2D 1H-15N TROSY temp compensated 1 mM [U-100% 15N] entity_1-1, 1 mM RNA (71-MER)-2 90% H2O/10% D2O 0 7.6 ambient 310
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 900
NMR Refinement Method Details Software simulated annealing TopSpin
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 40 Conformers Submitted Total Number 19 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin Bruker Biospin 2 data analysis Sparky Goddard 3 structure solution CYANA Guntert, Mumenthaler and Wuthrich 4 refinement Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo and Kollm