2M3C
Solution Structure of gammaM7-Crystallin
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 15N-edited NOESY-HSQC | 25 mM [U-2H] imidazole, 20 mM potassium chloride, 2 mM DTT, 0.04 % sodium azide | 90% H2O/10% D2O | 20 | 6.2 | ambient | 305 | |
2 | 3D 13C-edited HMQC-NOESY-HMQC | 25 mM [U-2H] imidazole, 20 mM potassium chloride, 2 mM DTT, 0.04 % sodium azide | 90% H2O/10% D2O | 20 | 6.2 | ambient | 305 | |
3 | RDC by HSQC-TROSY | 25 mM [U-2H] imidazole, 20 mM potassium chloride, 2 mM DTT, 0.04 % sodium azide | 90% H2O/10% D2O | 20 | 6.2 | ambient | 305 | |
4 | 3D HNCA | 25 mM [U-2H] imidazole, 20 mM potassium chloride, 2 mM DTT, 0.04 % sodium azide | 90% H2O/10% D2O | 20 | 6.2 | ambient | 305 | |
5 | 3D CBCA(CO)NH | 25 mM [U-2H] imidazole, 20 mM potassium chloride, 2 mM DTT, 0.04 % sodium azide | 90% H2O/10% D2O | 20 | 6.2 | ambient | 305 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 800 |
2 | Bruker | DRX | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 15 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
2 | chemical shift assignment | NMRView | Johnson, One Moon Scientific | |
3 | peak picking | NMRView | Johnson, One Moon Scientific | |
4 | data analysis | NMRView | Johnson, One Moon Scientific | |
5 | structure solution | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
6 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
7 | refinement | AQUA | Rullmann, Doreleijers and Kaptein | |
8 | refinement | ProcheckNMR | Laskowski and MacArthur | |
9 | data analysis | TALOS | Cornilescu, Delaglio and Bax | |
10 | collection | XwinNMR | Bruker Biospin |