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Structural Basis of Microtubule Plus End Tracking by XMAP215, CLIP-170 and EB1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 293 11.5% 2-propanol, 190 mM Sodium citrate, 100 mM Hepes, Protein concentration 20 mg/ml, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.07 40.72
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 29.334 α = 90 b = 65.22 β = 96.24 c = 63.091 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2001-10-10 M MAD 2 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 0.9798, 1.1271, 0.7999 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.25 50 97.4 0.054 5.4 13.8 63420
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.25 1.29 95.7 0.321 32.1 3.2 5181
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.25 45.22 63420 6318 97.32 0.177 0.174 0.1749 0.198 RANDOM 12.271
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.03 0.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.235 r_dihedral_angle_4_deg 14.908 r_dihedral_angle_3_deg 12.164 r_dihedral_angle_1_deg 4.434 r_scangle_it 3.209 r_sphericity_free 2.779 r_sphericity_bonded 2.474 r_scbond_it 2.269 r_mcangle_it 1.55 r_rigid_bond_restr 1.461
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.235 r_dihedral_angle_4_deg 14.908 r_dihedral_angle_3_deg 12.164 r_dihedral_angle_1_deg 4.434 r_scangle_it 3.209 r_sphericity_free 2.779 r_sphericity_bonded 2.474 r_scbond_it 2.269 r_mcangle_it 1.55 r_rigid_bond_restr 1.461 r_angle_refined_deg 1.033 r_mcbond_it 0.999 r_nbtor_refined 0.311 r_nbd_refined 0.196 r_symmetry_vdw_refined 0.176 r_xyhbond_nbd_refined 0.096 r_symmetry_hbond_refined 0.085 r_chiral_restr 0.076 r_bond_refined_d 0.008 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1974 Nucleic Acid Atoms Solvent Atoms 302 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement SCALEPACK data scaling CNS phasing CNS refinement DENZO data reduction PDB_EXTRACT data extraction Blu-Ice data collection