☰ Navigation Tabs
Crystal structure of the C-terminal domain of wzt
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.6 293 24% PEG 5000 MME, 6% (v/v) glycerol, 0.4 M NaCl, 0.16 M (NH4)2SO4, 0.08 M Na Acetate, pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.317657 46.929165
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 106.081 α = 90 b = 106.081 β = 90 c = 70.351 γ = 90
Symmetry Space Group P 42 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2005-11-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 17-ID 1.000 APS 17-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.3 20 99.8 0.057 16.5 6.9 98312 98154 -3 -3 15.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.3 1.35 100 0.444 6.4 9705
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.3 20 96876 96876 4829 98.48 0.167 0.167 0.166 0.2006 0.182 0.2143 RANDOM 15.626
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.27 0.27 -0.53
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.849 r_dihedral_angle_4_deg 19.358 r_dihedral_angle_3_deg 11.934 r_dihedral_angle_1_deg 6.161 r_scangle_it 2.582 r_scbond_it 1.775 r_angle_refined_deg 1.456 r_mcangle_it 1.251 r_angle_other_deg 0.827 r_mcbond_it 0.738
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.849 r_dihedral_angle_4_deg 19.358 r_dihedral_angle_3_deg 11.934 r_dihedral_angle_1_deg 6.161 r_scangle_it 2.582 r_scbond_it 1.775 r_angle_refined_deg 1.456 r_mcangle_it 1.251 r_angle_other_deg 0.827 r_mcbond_it 0.738 r_symmetry_vdw_other 0.249 r_symmetry_vdw_refined 0.239 r_nbd_refined 0.217 r_symmetry_hbond_refined 0.214 r_mcbond_other 0.214 r_xyhbond_nbd_refined 0.194 r_nbd_other 0.192 r_nbtor_refined 0.184 r_chiral_restr 0.095 r_nbtor_other 0.082 r_bond_refined_d 0.012 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2773 Nucleic Acid Atoms Solvent Atoms 364 Heterogen Atoms 21
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SOLVE phasing RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection