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X-ray crystal structure of the intracellular Chorismate mutase from Mycobactrerium Tuberculosis in complex with malate
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 9 0.1M MMT BUFFER PH 9, 25% W/V PEG 1500
Crystal Properties Matthews coefficient Solvent content 1.8 21.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 62.269 α = 90 b = 62.269 β = 90 c = 37.483 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU IMAGE PLATE VARIMAX HF 2007-10-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.65 20.76 99.9 0.05 23.81 6.62 9314 -3.7 25.9
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.65 1.69 100 0.68 2.3 6.47
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.65 18.98 8844 439 99.8 0.183 0.18 0.1866 0.235 0.2311 RANDOM 19.71
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.13 -0.13 0.26
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 27.703 r_dihedral_angle_4_deg 22.816 r_dihedral_angle_3_deg 14.951 r_scangle_it 6.303 r_dihedral_angle_1_deg 5.032 r_scbond_it 4.803 r_mcangle_it 2.586 r_mcbond_it 2.198 r_angle_refined_deg 1.6 r_angle_other_deg 1.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 27.703 r_dihedral_angle_4_deg 22.816 r_dihedral_angle_3_deg 14.951 r_scangle_it 6.303 r_dihedral_angle_1_deg 5.032 r_scbond_it 4.803 r_mcangle_it 2.586 r_mcbond_it 2.198 r_angle_refined_deg 1.6 r_angle_other_deg 1.04 r_symmetry_vdw_other 0.332 r_nbd_refined 0.231 r_nbd_other 0.197 r_nbtor_refined 0.173 r_symmetry_vdw_refined 0.155 r_xyhbond_nbd_refined 0.139 r_symmetry_hbond_refined 0.092 r_nbtor_other 0.084 r_chiral_restr 0.078 r_bond_refined_d 0.019 r_gen_planes_refined 0.006 r_bond_other_d 0.003 r_gen_planes_other 0.002 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 600 Nucleic Acid Atoms Solvent Atoms 37 Heterogen Atoms 9
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling PHASER phasing