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Crystal structure of rat angiotensinogen in C2 space group
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.8 20-25% PEG3350, 0.2M MGSO4, 0.1M TRIS -HCL, PH7.8
Crystal Properties Matthews coefficient Solvent content 2.4 49
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 130.499 α = 90 b = 49.539 β = 90.84 c = 150.275 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2008-07-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 41.6 98.5 0.22 8 4.7 23736 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.8 2.95 96.8 1.04 1.2 4.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT NONE 2.8 50 22489 1212 98.2 0.283 0.282 0.31 0.2795 RANDOM 23.2
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.47 4.5 -1.35 1.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.159 r_dihedral_angle_3_deg 15.61 r_dihedral_angle_4_deg 15.571 r_dihedral_angle_1_deg 5.409 r_angle_refined_deg 0.929 r_angle_other_deg 0.834 r_scangle_it 0.633 r_mcangle_it 0.467 r_scbond_it 0.343 r_mcbond_it 0.254
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.159 r_dihedral_angle_3_deg 15.61 r_dihedral_angle_4_deg 15.571 r_dihedral_angle_1_deg 5.409 r_angle_refined_deg 0.929 r_angle_other_deg 0.834 r_scangle_it 0.633 r_mcangle_it 0.467 r_scbond_it 0.343 r_mcbond_it 0.254 r_chiral_restr 0.079 r_mcbond_other 0.023 r_bond_refined_d 0.006 r_bond_other_d 0.004 r_gen_planes_refined 0.003 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6452 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement PHASER phasing