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Crystal structure of the N-domain of FKBP22 from Shewanella sp. SIB1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.2 277 0.1M Na/K Phosphate, 20% PEG 1000, 0.2 M NaCl, pH 6.2, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.38 48.35
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 39.703 α = 90 b = 39.703 β = 90 c = 101.6 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD mirrors 2010-07-15 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL44B2 0.97888, 0.97919, 0.96500 SPring-8 BL44B2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 50 98.3 0.114 0.119 18.2 5.4 7712 5 5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.93 100 0.423 0.398 2.6 5.3 364
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.9 34.38 7299 353 97.95 0.23386 0.23179 0.2302 0.27597 0.2703 RANDOM 30.92
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.03 0.51 1.03 -1.54
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.833 r_dihedral_angle_3_deg 20.107 r_dihedral_angle_4_deg 14.891 r_scangle_it 10.069 r_dihedral_angle_1_deg 7.448 r_scbond_it 6.682 r_mcangle_it 3.868 r_mcbond_it 2.182 r_angle_refined_deg 1.015 r_chiral_restr 0.082
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.833 r_dihedral_angle_3_deg 20.107 r_dihedral_angle_4_deg 14.891 r_scangle_it 10.069 r_dihedral_angle_1_deg 7.448 r_scbond_it 6.682 r_mcangle_it 3.868 r_mcbond_it 2.182 r_angle_refined_deg 1.015 r_chiral_restr 0.082 r_gen_planes_refined 0.019 r_bond_refined_d 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 487 Nucleic Acid Atoms Solvent Atoms 28 Heterogen Atoms
Software Software Software Name Purpose BL44 data collection SHELXS phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling