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Structure of ground-state bovine rhodospin in a hexagonal crystal form
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1GZM The A chain of PDB entry 1GZM, after suitable transformation to this space group.
Crystallization Crystal Properties Matthews coefficient Solvent content 3.05 59.71
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 103.82 α = 90 b = 103.82 β = 90 c = 76.59 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION The A chain of PDB entry 1GZM, after suitable transformation to this space group. 2.646 44.955 1.99 13785 688 99.79 0.19 0.188 0.1818 0.216 0.2076 68.097
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 4.64 4.64 -9.281
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 25.664 f_angle_d 1.227 f_chiral_restr 0.069 f_bond_d 0.008 f_plane_restr 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2603 Nucleic Acid Atoms Solvent Atoms 20 Heterogen Atoms 265
Software Software Software Name Purpose PHENIX refinement PDB_EXTRACT data extraction REFMAC refinement