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Crystal Structure of Toluene 4-Monoxygenase Hydroxylase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.5 291 MEPEG 2K, CaCl2, HEPES, AZIDE, pH 7.5, vapor diffusion, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.08 40.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 56.822 α = 90 b = 181.481 β = 107.62 c = 89.917 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 91 CCD MARMOSAIC 300 mm CCD 2007-11-08 molecular replacement
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 23-ID-D 0.9273 APS 23-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.85 100 98.6 0.097 4.3 145120
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.85 1.92 90 0.557 3.3 13214
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.85 49.45 145056 7264 98.5 0.167 0.164 0.214 0.223 RANDOM 24.729
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.06 0.18 -0.12 0.17
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.145 r_dihedral_angle_4_deg 20.54 r_dihedral_angle_3_deg 14.401 r_dihedral_angle_1_deg 5.831 r_scangle_it 3.444 r_scbond_it 2.32 r_angle_refined_deg 1.468 r_mcangle_it 1.411 r_mcbond_it 0.944 r_nbtor_refined 0.307
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.145 r_dihedral_angle_4_deg 20.54 r_dihedral_angle_3_deg 14.401 r_dihedral_angle_1_deg 5.831 r_scangle_it 3.444 r_scbond_it 2.32 r_angle_refined_deg 1.468 r_mcangle_it 1.411 r_mcbond_it 0.944 r_nbtor_refined 0.307 r_symmetry_vdw_refined 0.245 r_nbd_refined 0.208 r_symmetry_hbond_refined 0.179 r_metal_ion_refined 0.143 r_xyhbond_nbd_refined 0.141 r_chiral_restr 0.137 r_symmetry_metal_ion_refined 0.098 r_bond_refined_d 0.015 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 14424 Nucleic Acid Atoms Solvent Atoms 1459 Heterogen Atoms 16
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling MOLREP phasing REFMAC refinement PDB_EXTRACT data extraction