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Crystal Structure of Beta-Lactamse Inhibitory Protein-Like Protein (BLP), Selenomethionine Derivative
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 hanging drop 8.5 294 11 mg/ml protein in 30 mM tris, 150 mM NaCl mixed 1:1 with well solution 30% PEG 4000, 0.2 M sodium acetate trihydrate, pH 8.5, hanging drop, temperature 294K
Crystal Properties Matthews coefficient Solvent content 1.97 37.68
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 101.167 α = 90 b = 67.195 β = 90 c = 41.208 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM Q315r 2006-02-27 SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 0.9795 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 55.99 96.5 0.084 34.3 7.6 30474
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.7 1.76 96.2 0.23 7.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.7 55 30103 1598 100 0.20328 0.2 0.1886 0.273 0.2623 RANDOM 11.042
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.21 0.33 -0.55
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.189 r_dihedral_angle_4_deg 18.831 r_dihedral_angle_3_deg 13.558 r_sphericity_free 8.397 r_dihedral_angle_1_deg 6.946 r_sphericity_bonded 3.783 r_scangle_it 3.478 r_mcangle_it 3.055 r_scbond_it 2.696 r_mcbond_it 2.267
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.189 r_dihedral_angle_4_deg 18.831 r_dihedral_angle_3_deg 13.558 r_sphericity_free 8.397 r_dihedral_angle_1_deg 6.946 r_sphericity_bonded 3.783 r_scangle_it 3.478 r_mcangle_it 3.055 r_scbond_it 2.696 r_mcbond_it 2.267 r_rigid_bond_restr 2.111 r_angle_refined_deg 2.09 r_nbtor_refined 0.315 r_symmetry_vdw_refined 0.286 r_symmetry_hbond_refined 0.277 r_nbd_refined 0.249 r_xyhbond_nbd_refined 0.183 r_chiral_restr 0.141 r_bond_refined_d 0.027 r_gen_planes_refined 0.011 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2486 Nucleic Acid Atoms Solvent Atoms 479 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SHELX phasing REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection SCALA data scaling SHELXD phasing