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Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3MJ7
Sample Coxsackievirus B3 complexed with CAR Sample Components Human coxsackievirus B3 Coxsackievirus and adenovirus receptor
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK III Cryogen Name OTHER Sample Vitrification Details Plunged into ethane-propane (FEI VITROBOT MARK III)
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 9302 Reported Resolution (Å) 9 Resolution Method FSC 0.5 CUT-OFF Other Details (Single particle details: Particles were selected using EMAN) (Single particle--Applied symmetry: I) Refinement Type Symmetry Type POINT Point Symmetry I
Map-Model Fitting and Refinement Id 1 (3MJ7) Refinement Space REAL Refinement Protocol RIGID BODY FIT Refinement Target correlation coefficient Overall B Value Fitting Procedure Details REFINEMENT PROTOCOL--rigid body
Data Acquisition Detector Type KODAK SO-163 FILM Electron Dose (electrons/Å**2) 15
Imaging Experiment 1 Date of Experiment 2012-08-01 Temperature (Kelvin) Microscope Model FEI TECNAI F20 Minimum Defocus (nm) 1980 Maximum Defocus (nm) 3660 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2 Imaging Mode BRIGHT FIELD Specimen Holder Model GATAN LIQUID NITROGEN Nominal Magnification 50000 Calibrated Magnification 50000 Source FIELD EMISSION GUN Acceleration Voltage (kV) 200 Imaging Details
EM Software Task Software Package Version MODEL FITTING Situs RECONSTRUCTION Auto3DEM RECONSTRUCTION EMAN
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details AUTO3DEM