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Crystal Structure of S. pombe Brc1 BRCT5-BRCT6 domains in complex with phosphorylated H2A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 295 17-20% PEG3350, 200 mM ammonium chloride, pH unk, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.08 40.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 41.577 α = 90 b = 71.117 β = 90 c = 72.007 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2006-03-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 12.3.1 ALS 12.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.45 50 95.6 0.052 21.7 3.8 36848 36848
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.45 1.5 67.7 0.239 2.6 1.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.45 50 34965 34965 1831 95.5 0.133 0.131 0.1378 0.188 0.1916 RANDOM 15.41
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.05 -0.14 0.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.935 r_dihedral_angle_4_deg 20.8 r_dihedral_angle_3_deg 12.034 r_sphericity_free 7.994 r_dihedral_angle_1_deg 6.458 r_scangle_it 5.856 r_sphericity_bonded 4.532 r_scbond_it 4.273 r_mcangle_it 2.936 r_rigid_bond_restr 2.438
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.935 r_dihedral_angle_4_deg 20.8 r_dihedral_angle_3_deg 12.034 r_sphericity_free 7.994 r_dihedral_angle_1_deg 6.458 r_scangle_it 5.856 r_sphericity_bonded 4.532 r_scbond_it 4.273 r_mcangle_it 2.936 r_rigid_bond_restr 2.438 r_mcbond_it 2.092 r_angle_refined_deg 1.844 r_nbtor_refined 0.32 r_symmetry_hbond_refined 0.259 r_nbd_refined 0.257 r_xyhbond_nbd_refined 0.228 r_symmetry_vdw_refined 0.207 r_chiral_restr 0.155 r_bond_refined_d 0.021 r_gen_planes_refined 0.01 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1745 Nucleic Acid Atoms Solvent Atoms 430 Heterogen Atoms
Software Software Software Name Purpose Blu-Ice data collection MOLREP phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling