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Crystal structure of enoyl-coa hydratase from Mycobacterium smegmatis, iodide soak
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 290 200MM NAOAC, 100M BISTRISPROPANE, 20% PEG 3350; protein AT 27MG/ML, SOAKED IN 100MM BISTRISPROPANE, 25% PEG 3350, 400MM NAI; CRYO: 15% EDO, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K, pH 8.5
Crystal Properties Matthews coefficient Solvent content 3.04 59
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 170.06 α = 90 b = 170.06 β = 90 c = 170.06 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RIGAKI SATURN 944+ 2009-05-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU FR-E+ SUPERBRIGHT 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 45.45 99.3 0.098 30.12 41229 -3 22.91
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.26 98.3 0.347 10
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD, MR THROUGHOUT 2.2 45.45 41229 2080 99.7 0.151 0.149 0.153 0.181 0.1839 RANDOM 11.94
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.169 r_dihedral_angle_4_deg 13.874 r_dihedral_angle_3_deg 12.396 r_dihedral_angle_1_deg 5.567 r_scangle_it 3.113 r_scbond_it 2.009 r_angle_refined_deg 1.331 r_mcangle_it 1.178 r_angle_other_deg 0.931 r_mcbond_it 0.648
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.169 r_dihedral_angle_4_deg 13.874 r_dihedral_angle_3_deg 12.396 r_dihedral_angle_1_deg 5.567 r_scangle_it 3.113 r_scbond_it 2.009 r_angle_refined_deg 1.331 r_mcangle_it 1.178 r_angle_other_deg 0.931 r_mcbond_it 0.648 r_mcbond_other 0.17 r_chiral_restr 0.082 r_bond_refined_d 0.015 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4391 Nucleic Acid Atoms Solvent Atoms 493 Heterogen Atoms 27
Software Software Software Name Purpose StructureStudio data collection PHASER phasing REFMAC refinement XDS data reduction XSCALE data scaling