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RTA in complex with N-(furanylmethyl)-7-carbamoyl-pterin
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.9 277 4.1% PEG 8000, 75 mM Bicine pH 8.9, 10 mM 2-mercaptoethanol, 1 mM EDTA, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.26 45.48
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.444 α = 90 b = 67.328 β = 112.52 c = 49.462 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IV++ 2010-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 HF 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.89 50 95.9 0.05 23.9 3.7 19711
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.89 1.92 91.5 0.432 3.5 936
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.89 33.67 19694 1009 95.64 0.1971 0.1948 0.2028 0.2386 0.2348 RANDOM 38.3797
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.11 -0.36 -0.88 1.72
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.646 r_dihedral_angle_4_deg 22.604 r_dihedral_angle_3_deg 15.074 r_dihedral_angle_1_deg 5.92 r_scangle_it 5.006 r_scbond_it 3.025 r_mcangle_it 2.038 r_angle_refined_deg 1.82 r_mcbond_it 1.197 r_angle_other_deg 0.807
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.646 r_dihedral_angle_4_deg 22.604 r_dihedral_angle_3_deg 15.074 r_dihedral_angle_1_deg 5.92 r_scangle_it 5.006 r_scbond_it 3.025 r_mcangle_it 2.038 r_angle_refined_deg 1.82 r_mcbond_it 1.197 r_angle_other_deg 0.807 r_mcbond_other 0.305 r_chiral_restr 0.115 r_bond_refined_d 0.023 r_gen_planes_refined 0.01 r_gen_planes_other 0.001 r_bond_other_d
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2041 Nucleic Acid Atoms Solvent Atoms 56 Heterogen Atoms 21
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling MOLREP phasing REFMAC refinement PDB_EXTRACT data extraction StructureStudio data collection HKL-2000 data reduction HKL-2000 data scaling