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rhesus macaque MHC class I molecule Mamu-B*17-IW11
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2BVO
Crystallization Crystal Properties Matthews coefficient Solvent content 2.78 55.77
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 45.219 α = 96.45 b = 69.025 β = 88.79 c = 81.001 γ = 89.94
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 2009-06-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 50 28767 26.49
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 2BVO 2.602 27.276 1.98 28767 28745 1450 96.28 0.2304 0.2279 0.2226 0.2772 0.2692 29.153
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.0927 0.4429 -0.1191 -0.3253 -0.237 0.418
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 11.836 f_angle_d 0.453 f_chiral_restr 0.033 f_bond_d 0.004 f_plane_restr 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6378 Nucleic Acid Atoms Solvent Atoms 506 Heterogen Atoms
Software Software Software Name Purpose PHENIX refinement