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Structure of HTH-type transcriptional regulator EthR, G106W mutant
Crystallization Crystal Properties Matthews coefficient Solvent content 2.31 46.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 119.66 α = 90 b = 119.66 β = 90 c = 33.71 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.86 19.67 23846
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.86 19.67 19529 1064 97.75 0.1798 0.17716 0.22996 0.2103 RANDOM 20.267
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 0.01 -0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.142 r_dihedral_angle_4_deg 16.706 r_dihedral_angle_3_deg 13.663 r_dihedral_angle_1_deg 5.225 r_sphericity_free 4.42 r_scangle_it 3.823 r_scbond_it 2.859 r_sphericity_bonded 2.739 r_rigid_bond_restr 2.418 r_mcangle_it 1.718
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.142 r_dihedral_angle_4_deg 16.706 r_dihedral_angle_3_deg 13.663 r_dihedral_angle_1_deg 5.225 r_sphericity_free 4.42 r_scangle_it 3.823 r_scbond_it 2.859 r_sphericity_bonded 2.739 r_rigid_bond_restr 2.418 r_mcangle_it 1.718 r_angle_refined_deg 1.294 r_mcbond_it 1.204 r_nbtor_refined 0.301 r_symmetry_vdw_refined 0.221 r_nbd_refined 0.212 r_xyhbond_nbd_refined 0.186 r_symmetry_hbond_refined 0.17 r_chiral_restr 0.091 r_bond_refined_d 0.013 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1520 Nucleic Acid Atoms Solvent Atoms 216 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement