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Barium derivative of human LFABP
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 hanging drop 8 293 30% PEG MME 2000, 0.15M KBr, pH 8.0, hanging drop, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.2 43.99
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 30.293 α = 90 b = 57.122 β = 90 c = 74.11 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate mirrors 2009-09-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 99.4 0.086 10.7 13.4 9148 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 94.2 0.446 12.1 831
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2 8 9148 8924 895 99.81 0.2181 0.2143 0.2156 0.2504 0.2568 RANDOM 27.8288
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.62 -1 -0.61
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.356 r_dihedral_angle_3_deg 14.737 r_dihedral_angle_4_deg 6.812 r_dihedral_angle_1_deg 5.487 r_scangle_it 2.501 r_scbond_it 1.418 r_angle_refined_deg 1.167 r_mcangle_it 0.965 r_mcbond_it 0.524 r_nbtor_refined 0.302
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.356 r_dihedral_angle_3_deg 14.737 r_dihedral_angle_4_deg 6.812 r_dihedral_angle_1_deg 5.487 r_scangle_it 2.501 r_scbond_it 1.418 r_angle_refined_deg 1.167 r_mcangle_it 0.965 r_mcbond_it 0.524 r_nbtor_refined 0.302 r_nbd_refined 0.189 r_symmetry_vdw_refined 0.133 r_metal_ion_refined 0.13 r_symmetry_hbond_refined 0.128 r_xyhbond_nbd_refined 0.116 r_chiral_restr 0.089 r_bond_refined_d 0.008 r_gen_planes_refined 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 998 Nucleic Acid Atoms Solvent Atoms 156 Heterogen Atoms 38
Software Software Software Name Purpose SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction MAR345dtb data collection HKL-2000 data reduction HKL-2000 data scaling PHENIX phasing