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Barium derivative of human LFABP
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 hanging drop 8 293 30% PEG MME 2000, 0.15M KBr, pH 8.0, hanging drop, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.21 44.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 30.216 α = 90 b = 57.24 β = 90 c = 74.491 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate mirrors 2009-09-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.22 50 99.7 0.068 16.6 13.2 6813 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.22 2.3 97.2 0.257 12.2 659
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.22 8 6785 6769 658 99.83 0.2174 0.2088 0.2118 0.2953 0.2961 RANDOM 30.6688
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.48 -1.01 -0.48
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.199 r_dihedral_angle_3_deg 17.857 r_dihedral_angle_4_deg 10.422 r_dihedral_angle_1_deg 5.717 r_scangle_it 2.474 r_scbond_it 1.459 r_angle_refined_deg 1.262 r_mcangle_it 1.024 r_mcbond_it 0.551 r_nbtor_refined 0.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.199 r_dihedral_angle_3_deg 17.857 r_dihedral_angle_4_deg 10.422 r_dihedral_angle_1_deg 5.717 r_scangle_it 2.474 r_scbond_it 1.459 r_angle_refined_deg 1.262 r_mcangle_it 1.024 r_mcbond_it 0.551 r_nbtor_refined 0.3 r_nbd_refined 0.201 r_symmetry_vdw_refined 0.129 r_xyhbond_nbd_refined 0.128 r_symmetry_hbond_refined 0.109 r_metal_ion_refined 0.103 r_chiral_restr 0.088 r_bond_refined_d 0.01 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1006 Nucleic Acid Atoms Solvent Atoms 97 Heterogen Atoms 42
Software Software Software Name Purpose SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction MAR345dtb data collection HKL-2000 data reduction HKL-2000 data scaling PHENIX phasing