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Structure of the human heart fatty acid-binding protein in complex with 1-anilinonaphtalene-8-sulphonic acid
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6 293 100mM MES, 30% PEG3350, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.78 30.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 127.157 α = 90 b = 29.359 β = 112.47 c = 140.689 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX-225 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD RAYONIX MX-225 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL44XU 0.9 SPring-8 BL44XU 2 SYNCHROTRON SPRING-8 BEAMLINE BL38B1 0.9 SPring-8 BL38B1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.14 50 90 0.063 7.7 3.6 24494 1 1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.15 29.85 24208 1220 89.78 0.2214 0.2176 0.2912 0.2678 RANDOM 29.0587
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.11 -0.02 0.05 0.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.712 r_dihedral_angle_4_deg 19.039 r_dihedral_angle_3_deg 17.56 r_dihedral_angle_1_deg 6.536 r_scangle_it 3.855 r_scbond_it 2.555 r_angle_refined_deg 1.821 r_mcangle_it 1.677 r_mcbond_it 0.917 r_chiral_restr 0.111
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.712 r_dihedral_angle_4_deg 19.039 r_dihedral_angle_3_deg 17.56 r_dihedral_angle_1_deg 6.536 r_scangle_it 3.855 r_scbond_it 2.555 r_angle_refined_deg 1.821 r_mcangle_it 1.677 r_mcbond_it 0.917 r_chiral_restr 0.111 r_bond_refined_d 0.018 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4152 Nucleic Acid Atoms Solvent Atoms 174 Heterogen Atoms 84
Software Software Software Name Purpose SCALEPACK data scaling MOLREP phasing REFMAC refinement PDB_EXTRACT data extraction DENZO data reduction