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Crystal structure of the OTU domain of OTULIN at 1.3 Angstroms.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 100 MM MES/IMIDAZOLE PH 6.5, 30 MM MGCL2, 30 MM CACL2, 10% PEG 4000, 20% GLYCEROL
Crystal Properties Matthews coefficient Solvent content 2.32 47.02
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.49 α = 90 b = 72.01 β = 90 c = 94.67 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 287 CCD ADSC QUANTUM 315r MIRROR 2011-11-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.3 29.26 99.8 0.11 7.3 3.9 73748 3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.3 1.32 99.4 0.33 3.3 3.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT NONE 1.3 29.28 69951 3720 99.68 0.1268 0.12532 0.1398 0.15439 0.1669 RANDOM 16.75
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.49 -0.63 0.14
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.648 r_dihedral_angle_4_deg 18.639 r_sphericity_bonded 17.856 r_dihedral_angle_3_deg 13.352 r_rigid_bond_restr 9.723 r_dihedral_angle_1_deg 5.676 r_scangle_it 4.834 r_scbond_it 4.455 r_mcangle_it 4.055 r_mcbond_it 3.842
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.648 r_dihedral_angle_4_deg 18.639 r_sphericity_bonded 17.856 r_dihedral_angle_3_deg 13.352 r_rigid_bond_restr 9.723 r_dihedral_angle_1_deg 5.676 r_scangle_it 4.834 r_scbond_it 4.455 r_mcangle_it 4.055 r_mcbond_it 3.842 r_mcbond_other 3.834 r_angle_refined_deg 1.663 r_angle_other_deg 0.887 r_xyhbond_nbd_other 0.367 r_symmetry_vdw_refined 0.33 r_xyhbond_nbd_refined 0.294 r_symmetry_vdw_other 0.283 r_symmetry_hbond_refined 0.144 r_chiral_restr 0.105 r_metal_ion_refined 0.078 r_bond_refined_d 0.018 r_gen_planes_refined 0.009 r_bond_other_d 0.003 r_gen_planes_other 0.003 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_sphericity_free
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2168 Nucleic Acid Atoms Solvent Atoms 333 Heterogen Atoms 26
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALEPACK data scaling SHELX phasing