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N-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH N-(4-hydroxyphenyl) acetamide
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 293 0.1 M HEPES PH 7.0, 24-28% PEG 3350, 0.2 M (NH4)2SO4, 20 DEGREES CELSIUS.
Crystal Properties Matthews coefficient Solvent content 2 38.48
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 114.051 α = 90 b = 55.542 β = 94.88 c = 68.072 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 RIGAKU A200 2010-06-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU FR-E+ SUPERBRIGHT
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 67.83 99.5 0.07 10.8 3.6 33482
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.97 100 0.4 2 3.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.9 67.83 31776 1693 100 0.18548 0.18372 0.2041 0.21828 0.234 RANDOM 59.57
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.24 -0.65 -0.6 -0.75
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.031 r_dihedral_angle_4_deg 24.398 r_dihedral_angle_3_deg 11.966 r_dihedral_angle_1_deg 4.298 r_scangle_it 2.453 r_scbond_it 1.495 r_mcangle_it 1.207 r_angle_refined_deg 0.93 r_angle_other_deg 0.804 r_mcbond_it 0.63
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.031 r_dihedral_angle_4_deg 24.398 r_dihedral_angle_3_deg 11.966 r_dihedral_angle_1_deg 4.298 r_scangle_it 2.453 r_scbond_it 1.495 r_mcangle_it 1.207 r_angle_refined_deg 0.93 r_angle_other_deg 0.804 r_mcbond_it 0.63 r_mcbond_other 0.092 r_chiral_restr 0.053 r_bond_refined_d 0.007 r_gen_planes_refined 0.004 r_gen_planes_other 0.002 r_bond_other_d 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2754 Nucleic Acid Atoms Solvent Atoms 303 Heterogen Atoms 60
Software Software Software Name Purpose REFMAC refinement d*TREK data reduction d*TREK data scaling