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Zinc bound structure of a novel cold-adapted esterase from an Arctic intertidal metagenomic library
Crystallization Crystal Properties Matthews coefficient Solvent content 1.99 37.61
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.66 α = 90 b = 70.03 β = 90 c = 53.95 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.85 54 99.7 0.05 6.5 34844 33.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.85 1.9 96.5 0.72 5.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT NONE 1.85 25 17371 939 98.49 0.1786 0.17606 0.1803 0.22752 0.2235 RANDOM 22.269
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.39 -1.33 0.93
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.163 r_dihedral_angle_4_deg 13.256 r_dihedral_angle_3_deg 12.531 r_dihedral_angle_1_deg 5.435 r_scangle_it 2.876 r_scbond_it 1.849 r_mcangle_it 1.44 r_angle_refined_deg 1.344 r_angle_other_deg 0.893 r_mcbond_it 0.802
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.163 r_dihedral_angle_4_deg 13.256 r_dihedral_angle_3_deg 12.531 r_dihedral_angle_1_deg 5.435 r_scangle_it 2.876 r_scbond_it 1.849 r_mcangle_it 1.44 r_angle_refined_deg 1.344 r_angle_other_deg 0.893 r_mcbond_it 0.802 r_mcbond_other 0.176 r_chiral_restr 0.083 r_bond_refined_d 0.012 r_gen_planes_refined 0.006 r_bond_other_d 0.003 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1701 Nucleic Acid Atoms Solvent Atoms 123 Heterogen Atoms 3
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling SHELXCD phasing SHELXE phasing