X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.4349.47

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 39.501α = 90
b = 84.227β = 90
c = 89.819γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2008-07-25MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X06DA1.000SLSX06DA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.3738.1294.70.0885.112709
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.372.5794.50.7884

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.3738.121207460895.020.24090.23850.2846RANDOM63.765
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.04-4.234.27
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.58
r_dihedral_angle_4_deg18.692
r_dihedral_angle_3_deg14.944
r_dihedral_angle_1_deg5.742
r_scangle_it4.336
r_scbond_it3.234
r_mcangle_it2.066
r_mcbond_it1.626
r_angle_refined_deg1.045
r_angle_other_deg0.72
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.58
r_dihedral_angle_4_deg18.692
r_dihedral_angle_3_deg14.944
r_dihedral_angle_1_deg5.742
r_scangle_it4.336
r_scbond_it3.234
r_mcangle_it2.066
r_mcbond_it1.626
r_angle_refined_deg1.045
r_angle_other_deg0.72
r_mcbond_other0.335
r_symmetry_vdw_other0.197
r_nbd_refined0.193
r_nbtor_refined0.181
r_nbd_other0.176
r_xyhbond_nbd_refined0.158
r_symmetry_hbond_refined0.138
r_symmetry_vdw_refined0.09
r_nbtor_other0.083
r_chiral_restr0.062
r_xyhbond_nbd_other0.029
r_bond_refined_d0.008
r_gen_planes_refined0.004
r_gen_planes_other0.003
r_bond_other_d0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2121
Nucleic Acid Atoms
Solvent Atoms21
Heterogen Atoms34

Software

Software
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
XDSdata reduction
XSCALEdata scaling