☰ Navigation Tabs
Crystal structure of Plk1 Polo-box domain in complex with PL-42
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 10 293 0.1M CAPS pH 8, 0.2M LiSO4, 0.8M K2HPO4 NaH2PO4, vapor diffusion, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.86 33.79
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 35.4253 α = 90 b = 50.2621 β = 101.5152 c = 57.4562 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 270 2011-10-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-1A 1.0 Photon Factory BL-1A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 56.3 98.1 0.047 13.6 3 13200 13200
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.11 97.8 0.249 0.249 3 3 1912
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 2 50 13187 646 97.5 0.1991 0.1955 0.2465 0.241 37.5784
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.081 4.116 4.38 -3.299
RMS Deviations Key Refinement Restraint Deviation c_scangle_it 3.434 c_mcangle_it 2.522 c_scbond_it 2.329 c_mcbond_it 1.59 c_angle_d 1.243 c_bond_d 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1813 Nucleic Acid Atoms Solvent Atoms 78 Heterogen Atoms
Software Software Software Name Purpose SCALA data scaling CNS refinement PDB_EXTRACT data extraction SERGUI data collection