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Crystal structure of cIAP1 BIR3 bound to T3170284
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.5 295 3M NaCl,100mM Tris, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.32 47.07
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 30.645 α = 90 b = 68.591 β = 90 c = 117.592 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray CCD ADSC QUANTUM 315r 2009-05-28 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.3 0.976 ALS 5.0.3
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.249 50 99.5 69825 69825 1 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.249 1.27 92.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.249 20 65816 3498 99.33 0.15329 0.15239 0.16993 0.1926 RANDOM 17.593
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.33 -0.28 0.61
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.569 r_dihedral_angle_4_deg 16.782 r_dihedral_angle_3_deg 12.432 r_dihedral_angle_1_deg 4.2 r_scangle_it 2.585 r_mcangle_it 1.777 r_scbond_it 1.741 r_angle_refined_deg 1.259 r_mcbond_it 1.135 r_angle_other_deg 0.841
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.569 r_dihedral_angle_4_deg 16.782 r_dihedral_angle_3_deg 12.432 r_dihedral_angle_1_deg 4.2 r_scangle_it 2.585 r_mcangle_it 1.777 r_scbond_it 1.741 r_angle_refined_deg 1.259 r_mcbond_it 1.135 r_angle_other_deg 0.841 r_mcbond_other 0.288 r_symmetry_hbond_refined 0.253 r_symmetry_vdw_other 0.248 r_nbd_refined 0.234 r_nbtor_refined 0.204 r_xyhbond_nbd_other 0.185 r_nbd_other 0.183 r_xyhbond_nbd_refined 0.147 r_nbtor_other 0.084 r_chiral_restr 0.078 r_symmetry_vdw_refined 0.055 r_bond_refined_d 0.008 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1526 Nucleic Acid Atoms Solvent Atoms 382 Heterogen Atoms 78
Software Software Software Name Purpose HKL-2000 data collection MOLREP phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling