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Crystal structure of the outer membrane decaheme cytochrome OmcA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.5 289 0.1 M Bis TRIS Propane, 0.1 M MgCl2, 15% PEG 20000, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Crystal Properties Matthews coefficient Solvent content 4.69 73.76
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 92.64 α = 90 b = 245.38 β = 97.89 c = 135.63 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2012-03-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I24 0.97 Diamond I24
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 58.14 100 0.091 0.091 161304 161304 2 2 36.21
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.7 2.77 98.4 0.377 0.377 3.1 2.9 11901
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD 2.7 50.97 1.34 161229 161229 8080 98.43 0.1948 0.1929 0.1865 0.2304 0.2234 Random
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.6317 0.4906 0.2512 0.3805
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 14.585 f_angle_d 0.889 f_chiral_restr 0.055 f_bond_d 0.013 f_plane_restr 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 20903 Nucleic Acid Atoms Solvent Atoms 1748 Heterogen Atoms 1792
Software Software Software Name Purpose XDS data scaling SHELXS phasing PHENIX refinement xia2 data reduction XDS data reduction SCALA data scaling