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Crystal structure of mSting in complex with DMXAA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8 293 1.6 M ammonium sulfate, 0.1 M Tris-HCl, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.65 53.66
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 108.376 α = 90 b = 108.376 β = 90 c = 101.205 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 200 CCD ADSC QUANTUM 315 2013-07-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-E 0.9792 APS 24-ID-E
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.43 50 99.5 15852 15773 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.43 2.57 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.43 44.58 15852 15773 844 99.39 0.18398 0.18267 0.1883 0.20851 0.2053 RANDOM 60.849
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.35 0.35 0.35 -1.13
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.587 r_sphericity_bonded 25.044 r_dihedral_angle_4_deg 24.488 r_dihedral_angle_3_deg 20.997 r_rigid_bond_restr 14.648 r_long_range_B_refined 14.349 r_long_range_B_other 14.348 r_mcangle_other 13.94 r_scangle_other 13.762 r_mcangle_it 13.761
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.587 r_sphericity_bonded 25.044 r_dihedral_angle_4_deg 24.488 r_dihedral_angle_3_deg 20.997 r_rigid_bond_restr 14.648 r_long_range_B_refined 14.349 r_long_range_B_other 14.348 r_mcangle_other 13.94 r_scangle_other 13.762 r_mcangle_it 13.761 r_scbond_other 12.606 r_scbond_it 12.367 r_mcbond_it 12.004 r_mcbond_other 11.966 r_sphericity_free 10.46 r_dihedral_angle_1_deg 6.982 r_angle_other_deg 3.537 r_angle_refined_deg 1.789 r_chiral_restr 0.095 r_bond_refined_d 0.015 r_gen_planes_other 0.007 r_gen_planes_refined 0.006 r_bond_other_d r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2838 Nucleic Acid Atoms Solvent Atoms 32 Heterogen Atoms 42
Software Software Software Name Purpose CBASS data collection PHASER phasing REFMAC refinement RAPD data reduction RAPD data scaling