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Adhiron: a stable and versatile peptide display scaffold - full length adhiron
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 280 Morpheus (H05), 0.02 M Glycine, 0.02 M Sodium L-Glutamate, 0.02 M DL-Alanine, 0.02 M DL-Lysine Hydrochloride, 0.02 M DL-Serine, 0.1 M MOPS pH=7.50, 0.1 M HEPES sodium salt pH=7.50, 10.0% w/v Polyethylene glycol 20000, 20.0% w/v Polyethylene glycol 550 MME, VAPOR DIFFUSION, SITTING DROP, temperature 280K
Crystal Properties Matthews coefficient Solvent content 2.14 42.53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 35.855 α = 90 b = 35.855 β = 90 c = 61.847 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M-F 2013-01-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I24 0.9686 Diamond I24
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 36 99.3 0.082 18.9 12.8 7945 7889 2 2 27.6
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.75 1.78 91.6 0.897 2.6 7.7 398
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 1.75 35.855 0.99 7889 15115 696 97.32 0.1962 0.1947 0.196 0.2287 0.2342 random
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.8183 1.8183 -3.6366
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 15.275 f_angle_d 1.072 f_chiral_restr 0.079 f_bond_d 0.007 f_plane_restr 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 651 Nucleic Acid Atoms Solvent Atoms 43 Heterogen Atoms
Software Software Software Name Purpose GDA data collection PHASER phasing PHENIX refinement XDS data reduction Aimless data scaling