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Crystal structure of an N-terminal HTATIP fragment
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2EKO pdb entry 2EKO
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 291 20% PEG3350, 0.2 M calcium acetate. The protein sample may have been treated with trypsin, VAPOR DIFFUSION, temperature 291K
Crystal Properties Matthews coefficient Solvent content 1.94 36.55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.544 α = 90 b = 59.986 β = 100.65 c = 101.638 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD adsc q315 2012-02-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 1.2830 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 42.26 99.9 0.134 10.1 3.7 12878
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.8 2.95 99.9 0.565 2.8 3.7 1879
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT pdb entry 2EKO 2.8 99.89 12868 771 99.74 0.2277 0.2257 0.2281 0.2595 0.2594 THIN SHELLS (SFTOOLS) 36.3753
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -3.69 -1.77 3.72 0.59
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 22.814 r_dihedral_angle_4_deg 21.877 r_dihedral_angle_3_deg 15.27 r_dihedral_angle_1_deg 6.196 r_mcangle_it 2.177 r_angle_other_deg 1.389 r_angle_refined_deg 1.384 r_mcbond_it 1.282 r_mcbond_other 1.282 r_chiral_restr 0.074
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 22.814 r_dihedral_angle_4_deg 21.877 r_dihedral_angle_3_deg 15.27 r_dihedral_angle_1_deg 6.196 r_mcangle_it 2.177 r_angle_other_deg 1.389 r_angle_refined_deg 1.384 r_mcbond_it 1.282 r_mcbond_other 1.282 r_chiral_restr 0.074 r_bond_refined_d 0.014 r_bond_other_d 0.009 r_gen_planes_refined 0.007 r_gen_planes_other 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3956 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 13
Software Software Software Name Purpose Aimless data scaling MOLREP phasing REFMAC refinement PDB_EXTRACT data extraction XDS data reduction