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OXA-48 in complex with Avibactam at pH 6.5
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 298.15 1.8 M (NH4)2SO4, 0.1 M MES pH 6.5, 10 mM CoCl2, 2mM avibactam, VAPOR DIFFUSION, SITTING DROP, temperature 298.15K
Crystal Properties Matthews coefficient Solvent content 2.32 46.93
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 64.05 α = 90 b = 108.1 β = 90 c = 162.81 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX300HE 2013-06-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08B1-1 1.00 CLSI 08B1-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.54 65.03 91.2 37797 34471
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.54 2.65 91.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.54 65.03 35881 32724 1700 90.36 0.18568 0.18377 0.22215 0.2436 RANDOM 33.932
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.16 -1.82 2.98
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.281 r_dihedral_angle_4_deg 18.657 r_dihedral_angle_3_deg 16.022 r_long_range_B_refined 7.023 r_long_range_B_other 7.019 r_dihedral_angle_1_deg 5.872 r_scangle_other 5.016 r_mcangle_it 3.889 r_mcangle_other 3.889 r_scbond_it 3.093
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.281 r_dihedral_angle_4_deg 18.657 r_dihedral_angle_3_deg 16.022 r_long_range_B_refined 7.023 r_long_range_B_other 7.019 r_dihedral_angle_1_deg 5.872 r_scangle_other 5.016 r_mcangle_it 3.889 r_mcangle_other 3.889 r_scbond_it 3.093 r_scbond_other 3.093 r_mcbond_it 2.487 r_mcbond_other 2.487 r_angle_other_deg 1.531 r_angle_refined_deg 1.489 r_chiral_restr 0.084 r_bond_refined_d 0.011 r_gen_planes_refined 0.008 r_bond_other_d 0.006 r_gen_planes_other 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7894 Nucleic Acid Atoms Solvent Atoms 185 Heterogen Atoms 68
Software Software Software Name Purpose MxDC data collection PHASER phasing REFMAC refinement MOSFLM data reduction SCALEPACK data scaling