X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP6.5298.151.8 M (NH4)2SO4, 0.1 M MES pH 6.5, 10 mM CoCl2, 2mM avibactam, VAPOR DIFFUSION, SITTING DROP, temperature 298.15K
Crystal Properties
Matthews coefficientSolvent content
2.3246.93

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 64.05α = 90
b = 108.1β = 90
c = 162.81γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDRAYONIX MX300HE2013-06-13MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONCLSI BEAMLINE 08B1-11.00CLSI08B1-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.5465.0391.23779734471
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.542.6591.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.5465.033588132724170090.360.185680.183770.22215RANDOM33.932
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.16-1.822.98
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.281
r_dihedral_angle_4_deg18.657
r_dihedral_angle_3_deg16.022
r_long_range_B_refined7.023
r_long_range_B_other7.019
r_dihedral_angle_1_deg5.872
r_scangle_other5.016
r_mcangle_it3.889
r_mcangle_other3.889
r_scbond_it3.093
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.281
r_dihedral_angle_4_deg18.657
r_dihedral_angle_3_deg16.022
r_long_range_B_refined7.023
r_long_range_B_other7.019
r_dihedral_angle_1_deg5.872
r_scangle_other5.016
r_mcangle_it3.889
r_mcangle_other3.889
r_scbond_it3.093
r_scbond_other3.093
r_mcbond_it2.487
r_mcbond_other2.487
r_angle_other_deg1.531
r_angle_refined_deg1.489
r_chiral_restr0.084
r_bond_refined_d0.011
r_gen_planes_refined0.008
r_bond_other_d0.006
r_gen_planes_other0.006
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7894
Nucleic Acid Atoms
Solvent Atoms185
Heterogen Atoms68

Software

Software
Software NamePurpose
MxDCdata collection
PHASERphasing
REFMACrefinement
MOSFLMdata reduction
SCALEPACKdata scaling