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AZD9291 complex with wild type EGFR
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4WRG
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 291 0.1 M MES, 1 M sodium citrate
Crystal Properties Matthews coefficient Solvent content 3.37 63.54
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 144.886 α = 90 b = 144.886 β = 90 c = 144.886 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 IMAGE PLATE MAR scanner 345 mm plate 2014-11-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 HF 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 19.36 99.7 20.9 38.1 12574
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.8 2.95 100 2.3 38
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 4WRG 2.8 19.36 11944 628 99.59 0.19604 0.19344 0.1964 0.24411 0.24 RANDOM 59.318
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.313 r_dihedral_angle_4_deg 17.908 r_dihedral_angle_3_deg 16.3 r_dihedral_angle_1_deg 6.358 r_long_range_B_refined 5.94 r_long_range_B_other 5.939 r_scangle_other 4.428 r_mcangle_it 3.822 r_mcangle_other 3.813 r_scbond_it 2.806
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.313 r_dihedral_angle_4_deg 17.908 r_dihedral_angle_3_deg 16.3 r_dihedral_angle_1_deg 6.358 r_long_range_B_refined 5.94 r_long_range_B_other 5.939 r_scangle_other 4.428 r_mcangle_it 3.822 r_mcangle_other 3.813 r_scbond_it 2.806 r_scbond_other 2.804 r_mcbond_it 2.417 r_mcbond_other 2.41 r_angle_refined_deg 1.578 r_angle_other_deg 1.496 r_chiral_restr 0.081 r_bond_refined_d 0.012 r_gen_planes_refined 0.006 r_bond_other_d 0.003 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2177 Nucleic Acid Atoms Solvent Atoms 4 Heterogen Atoms 37
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling PHASER phasing