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A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 1.3-1.6 M (NH4)2SO4 , 0.1 M Bis-Tris pH 5.5-6.5
Crystal Properties Matthews coefficient Solvent content 3.68 66.58
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 245.034 α = 90 b = 245.034 β = 90 c = 94.52 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm 2013-10-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PETRA III, DESY BEAMLINE P11 1.0331 PETRA III, DESY P11
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 88.19 99.9 0.0118 29.4 9.5 71082
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.8 2.95 99.3 4.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.8 86.63 66951 3440 99.02 0.23039 0.22917 0.2332 0.25404 0.2567 RANDOM 66.83
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.31 0.31 -0.63
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.424 r_dihedral_angle_3_deg 16.49 r_dihedral_angle_4_deg 15.881 r_dihedral_angle_1_deg 5.618 r_long_range_B_refined 5.486 r_long_range_B_other 5.486 r_mcangle_it 3.47 r_mcangle_other 3.47 r_scangle_other 2.902 r_mcbond_it 2.048
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.424 r_dihedral_angle_3_deg 16.49 r_dihedral_angle_4_deg 15.881 r_dihedral_angle_1_deg 5.618 r_long_range_B_refined 5.486 r_long_range_B_other 5.486 r_mcangle_it 3.47 r_mcangle_other 3.47 r_scangle_other 2.902 r_mcbond_it 2.048 r_mcbond_other 2.048 r_scbond_it 1.66 r_scbond_other 1.656 r_angle_refined_deg 1.042 r_angle_other_deg 0.719 r_chiral_restr 0.056 r_bond_refined_d 0.005 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 13215 Nucleic Acid Atoms Solvent Atoms 114 Heterogen Atoms 117
Software Software Software Name Purpose REFMAC refinement XDS data processing PHASER phasing Coot model building PHENIX refinement