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CobK precorrin-6A reductase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 291 100
Crystal Properties Matthews coefficient Solvent content 2.45 49.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 33.87 α = 90 b = 73.14 β = 90 c = 103.22 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 2M 2014-06-28 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 1 0.978 SOLEIL PROXIMA 1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.63 42.17 100 19.4 7.4 32962
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.63 1.72 100 4.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.63 42.17 31240 1645 99.96 0.17632 0.17465 0.2082 0.2089 RANDOM 22.703
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.441 r_dihedral_angle_4_deg 22.499 r_dihedral_angle_3_deg 13.846 r_long_range_B_refined 9.249 r_long_range_B_other 8.979 r_dihedral_angle_1_deg 6.375 r_scangle_other 5.499 r_mcangle_other 3.757 r_mcangle_it 3.751 r_scbond_other 3.691
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.441 r_dihedral_angle_4_deg 22.499 r_dihedral_angle_3_deg 13.846 r_long_range_B_refined 9.249 r_long_range_B_other 8.979 r_dihedral_angle_1_deg 6.375 r_scangle_other 5.499 r_mcangle_other 3.757 r_mcangle_it 3.751 r_scbond_other 3.691 r_scbond_it 3.69 r_mcbond_it 2.46 r_mcbond_other 2.451 r_angle_refined_deg 2.303 r_angle_other_deg 0.994 r_chiral_restr 0.134 r_bond_refined_d 0.021 r_gen_planes_refined 0.011 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1788 Nucleic Acid Atoms Solvent Atoms 260 Heterogen Atoms 48
Software Software Software Name Purpose REFMAC refinement Aimless data scaling MOLREP phasing