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Structure of a hydrolase bound with an inhibitor
Crystallization Crystal Properties Matthews coefficient Solvent content 2.71 54.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 51.44 α = 104.07 b = 93.69 β = 94.18 c = 99.02 γ = 102.97
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-1 ESRF ID14-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 33.8 95.8 0.08 9.4 2 153821 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.83 91.9 0.42 1.9 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT NONE 1.8 95.17 146115 7706 95.82 0.21299 0.21112 0.2167 0.24855 0.252 RANDOM 25.748
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.42 -0.12 -0.35 0.31 -0.64 -0.17
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.247 r_dihedral_angle_4_deg 18.67 r_dihedral_angle_3_deg 15.523 r_dihedral_angle_1_deg 6.58 r_angle_refined_deg 1.698 r_angle_other_deg 1.012 r_mcangle_it 0.464 r_scbond_it 0.301 r_mcbond_it 0.256 r_mcbond_other 0.256
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.247 r_dihedral_angle_4_deg 18.67 r_dihedral_angle_3_deg 15.523 r_dihedral_angle_1_deg 6.58 r_angle_refined_deg 1.698 r_angle_other_deg 1.012 r_mcangle_it 0.464 r_scbond_it 0.301 r_mcbond_it 0.256 r_mcbond_other 0.256 r_chiral_restr 0.103 r_bond_refined_d 0.017 r_gen_planes_refined 0.009 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 10466 Nucleic Acid Atoms Solvent Atoms 905 Heterogen Atoms 34
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling