5FQT

Selective estrogen receptor downregulator antagonists: Tetrahydroisoquinoline phenols 4.


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
10.1 M PCTP, PH 6.5 (0.04 M SODIUM PROPIONATE, 0.02 M SODIUM CACODYLATE, 0.04 M BIS-TRIS PROPANE), 22% PEG3350, 0.2M MGCL2
Crystal Properties
Matthews coefficientSolvent content
2.0740.5

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 58.323α = 90
b = 58.323β = 90
c = 276.354γ = 120
Symmetry
Space GroupP 65 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100 MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND0.92000Diamond

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
125099.90.079193552

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONOTHERTHROUGHOUTNONE1.9950.5119355104399.910.195080.19310.23219RANDOM27.755
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.210.210.21-0.68
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.289
r_dihedral_angle_4_deg22.192
r_dihedral_angle_3_deg14.268
r_long_range_B_refined6.107
r_long_range_B_other6.036
r_dihedral_angle_1_deg5.243
r_scangle_other4.809
r_scbond_it3.334
r_scbond_other3.312
r_mcangle_other2.999
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.289
r_dihedral_angle_4_deg22.192
r_dihedral_angle_3_deg14.268
r_long_range_B_refined6.107
r_long_range_B_other6.036
r_dihedral_angle_1_deg5.243
r_scangle_other4.809
r_scbond_it3.334
r_scbond_other3.312
r_mcangle_other2.999
r_mcangle_it2.998
r_mcbond_it2.198
r_mcbond_other2.194
r_angle_refined_deg1.765
r_angle_other_deg0.95
r_chiral_restr0.109
r_bond_refined_d0.019
r_gen_planes_refined0.009
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1830
Nucleic Acid Atoms
Solvent Atoms87
Heterogen Atoms27

Software

Software
Software NamePurpose
REFMACrefinement