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Structure of membrane protein
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 LIPIDIC CUBIC PHASE 293 in meso lipidic cubic phase crystallization
Crystal Properties Matthews coefficient Solvent content 2.46 50.02
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 40.793 α = 63.61 b = 56.771 β = 78.48 c = 57.286 γ = 80.21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M-F 2015-11-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 1.85 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 60 81.9 0.051 0.997 8.64 1.88 49905
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.1 68.6 0.501 1.43 1.83
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2 50.8 25086 1311 87.4 0.17938 0.17724 0.1861 0.21999 0.2247 RANDOM 36.3
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.28 r_dihedral_angle_4_deg 22.765 r_dihedral_angle_3_deg 15.133 r_long_range_B_refined 7.465 r_long_range_B_other 7.464 r_scangle_other 5.474 r_dihedral_angle_1_deg 4.888 r_mcangle_it 4.362 r_mcangle_other 4.362 r_scbond_it 3.685
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.28 r_dihedral_angle_4_deg 22.765 r_dihedral_angle_3_deg 15.133 r_long_range_B_refined 7.465 r_long_range_B_other 7.464 r_scangle_other 5.474 r_dihedral_angle_1_deg 4.888 r_mcangle_it 4.362 r_mcangle_other 4.362 r_scbond_it 3.685 r_scbond_other 3.684 r_mcbond_it 3.116 r_mcbond_other 3.115 r_angle_refined_deg 1.751 r_angle_other_deg 1.049 r_chiral_restr 0.104 r_bond_refined_d 0.017 r_gen_planes_refined 0.009 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3315 Nucleic Acid Atoms Solvent Atoms 78 Heterogen Atoms 257
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling SHELXCD phasing SHELXDE phasing