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High dose Thaumatin - 40-80 ms.
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1LR2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 293 1.3 M sodium tartrate and 50 mM Tris, pH 6.8
Crystal Properties Matthews coefficient Solvent content 2.91 57.73
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 58.42 α = 90 b = 58.42 β = 90 c = 151.59 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 296 PIXEL DECTRIS PILATUS 6M 2015-10-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) 0.96863 PETRA III, EMBL c/o DESY P14 (MX2)
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.69 30 92.9 0.114 7.1 3.2 30580 26.83
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.69 1.75 0.72
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1LR2 1.69 19.93 30580 677 92.9 0.1764 0.1759 0.1743 0.2012 0.1999 RANDOM 25.389
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.623 r_dihedral_angle_4_deg 20.044 r_dihedral_angle_3_deg 14.508 r_dihedral_angle_1_deg 6.787 r_scbond_it 5.26 r_mcangle_it 3.918 r_mcbond_it 2.654 r_angle_refined_deg 2.634 r_chiral_restr 0.447 r_bond_refined_d 0.025
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.623 r_dihedral_angle_4_deg 20.044 r_dihedral_angle_3_deg 14.508 r_dihedral_angle_1_deg 6.787 r_scbond_it 5.26 r_mcangle_it 3.918 r_mcbond_it 2.654 r_angle_refined_deg 2.634 r_chiral_restr 0.447 r_bond_refined_d 0.025 r_gen_planes_refined 0.013
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1550 Nucleic Acid Atoms Solvent Atoms 68 Heterogen Atoms 20
Software Software Software Name Purpose XSCALE data scaling REFMAC refinement PDB_EXTRACT data extraction XDS data reduction MOLREP phasing